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Title: The gene expression difference in strain AT01, a mutant of Trichoderma reesei, with high ability of copper accumulation      
dateReleased:
04-26-2012
description:
The gene expression profile of AT01 was compared with a wild-type T. reesei strain in medium containing 0.7 mM Cu2+. A total of 627 genes were up-regulated and 305 genes were down-regulated under copper stress. The expression analysis showed that amino acid transport- and metabolism-related genes are up-regulated, which is associated with adenine metabolism. Furthermore, inorganic ion transport- and metabolism-associated genes, such as superoxide dismutase and copper transporters, were also up-regulated. Strain AT01 and wild-type strain were inoculated into YPD medium containing 1 mM CuSO4, and cultured at 25 °C for 5 d. Each sample was carried out with two repetitions.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-37518
refinement:
raw
alternateIdentifiers:
37518
keywords:
functional genomics
dateModified:
05-11-2012
availability:
available
types:
gene expression
name:
Trichoderma reesei QM6a
ID:
A-GEOD-15439
name:
Agilent-031368 Trichoderma reesei custom microarray [Probe Name version]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-37518/E-GEOD-37518.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-37518/E-GEOD-37518.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37518
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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