biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
| Title: | Effect of virX regulator on the expression of chromosomal genes of Clostridium perfringens
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| dateReleased: |
10-01-2012
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| description: |
The microarrays were subjected to two-color hybridization using Cy5 and Cy3 dyes incorporated in the cDNAs synthesized from total RNA samples of strains. We compared each gene’s transcription level between the wild-type (WT) strain 13 (labeled by Cy5) and the virX-mutant strain (TS186) (labeled by Cy3) on a single DNA microarray. Total RNA was isolated from exponentially growing cells from thevirX mutant and the wild-type. Gene expression levels were compared between thevirX mutant and wild-type strain 13
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| privacy: |
not applicable
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| aggregation: |
instance of dataset
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| ID: |
E-GEOD-37998
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| refinement: |
raw
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| alternateIdentifiers: |
37998
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| keywords: |
functional genomics
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| dateModified: |
05-03-2014
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| availability: |
available
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| types: |
gene expression
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| name: |
Clostridium perfringens str. 13
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| ID: |
A-GEOD-7332
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| name: |
Kyushu University Clostridium perfringens strain 13 DNA 27K microarray version 1
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-37998/E-GEOD-37998.raw.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-37998/E-GEOD-37998.processed.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| accessURL: | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE37998 |
| storedIn: |
Gene Expression Omnibus
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| qualifier: |
not compressed
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| format: |
HTML
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| accessType: |
landing page
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| primary: |
true
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| authentication: |
none
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| authorization: |
none
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| abbreviation: |
EBI
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| homePage: | http://www.ebi.ac.uk/ |
| ID: |
SCR:004727
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| name: |
European Bioinformatics Institute
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| homePage: | https://www.ebi.ac.uk/arrayexpress/ |
| ID: |
SCR:002964
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| name: |
ArrayExpress
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