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Title: Chip-chip from Candida albicans cells with HMS1-MYC, RTG1-MYC, RTG3-MYC, GFP-ZCF21, GFP-LYS14, GFP-LYS144      
dateReleased:
10-02-2012
description:
The transcription regulators HMS1, RTG1, RTG3, ZCF21, LYS14 and LYS144 play roles in the proliferation of C. albicans in a mammalian host. Chromatin immunoprecipitation (ChIP) of HMS1-MYC, RTG1-MYC, RTG3-MYC, GFP-ZCF21, GFP-LYS14, GFP-LYS144 followed by array hybridization (Agilent) uncovered a network of target genes required for C. albicans to thrive in the host. Comparison of IP/input in tagged strains to untagged cells immuniprecipitated with the same antibody.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-41237
refinement:
raw
alternateIdentifiers:
41237
keywords:
functional genomics
dateModified:
05-03-2014
availability:
available
types:
gene expression
name:
Candida albicans
ID:
A-GEOD-13696
name:
Candida albicans 181K tiling ChIP array (assembly Ca20)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-41237/E-GEOD-41237.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-41237/E-GEOD-41237.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE41237
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress