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Title: Genome-wide binding of Sd and Yki in imaginal discs      
dateReleased:
10-03-2012
description:
The transcription cofactor Yki drives growth and proliferation in part by controlling mitochondrial network formation. To determine if Yki and Sd are directly bound to DNA corresponding to mitochondrial genes, we used chromatin immunoprecipitation and whole genome tiling arrays (ChIP-chip) to identify regions bound by these factors in eye-antenna and wing imaginal discs. The supplementary .bed files contain all Yki or Sd binding sites (called at 5% FDR) in wing or eye-antenna imaginal discs, as well as shared Sd+Yki sites and associated target genes. Wing or eye-antenna imaginal discs ChIPped for Yki or Sd-GFP vs. input DNA from corresponding imaginal discs.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-26678
refinement:
raw
alternateIdentifiers:
26678
keywords:
functional genomics
dateModified:
05-04-2014
availability:
available
types:
gene expression
name:
Drosophila melanogaster
ID:
A-AFFY-146
name:
Affymetrix GeneChip Drosophila Tiling 2.0R Array [Dm_tiling2_MR]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-26678/E-GEOD-26678.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-26678/E-GEOD-26678.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE26678
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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