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Title: Identification of avian RIG-I responsive genes during influenza infection      
dateReleased:
12-12-2012
description:
Transcriptional profiling of chicken embryonic fibroblasts (DF-1 cells) comparing the effects of chicken cells transfected with duck RIG-I compared to empty-vector transfected cells following with low or highly pathogenic avian influenza. Goal was to determine the effects of duck RIG-I on influenza-induced immune gene expression. Two-condition experiment. Biological replicates for low pathogenic avian influenza infection: 3 empty-vector transfected replicates, 3 RIG-I transfected replicates. Biological replicates for highly pathogenic influenza infection: 2 empty-vector transfected replicates, 2 RIG-I transfected replicates.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-29596
refinement:
raw
alternateIdentifiers:
29596
keywords:
functional genomics
dateModified:
06-02-2014
availability:
available
types:
gene expression
name:
Gallus gallus
ID:
A-MEXP-1509
name:
Agilent Chicken 44k G2519F 015068 266 col x 170 rows
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-29596/E-GEOD-29596.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-29596/E-GEOD-29596.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE29596
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress