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Title: Expression data from wild-type Vibrio fischeri and a flrA deletion mutant      
dateReleased:
04-05-2013
description:
The marine bacterium Vibrio fischeri requires flagellar motility to undergo symbiotic initiation with its host, the Hawaiian bobtail squid Euprymna scolopes. We sought to identify the genes activated by the sigma54-dependent flagellar master regulator, FlrA, in V. fischeri, thereby determining the flagellar regulon in this model symbiont. We performed microarray analysis on wild-type Vibrio fischeri ES114 and a flrA deletion mutant, DM159, grown to mid-log phase in seawater tryptone, a condition in which cells are highly motile (two biological replicates per condition).
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-45772
refinement:
raw
alternateIdentifiers:
45772
keywords:
functional genomics
dateModified:
04-22-2013
availability:
available
types:
gene expression
name:
Aliivibrio fischeri
ID:
A-GEOD-5074
name:
Custom Vibrio fischeri GeneChip Array (Affymetrix)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-45772/E-GEOD-45772.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-45772/E-GEOD-45772.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE45772
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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