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Title: Transcription profiling by high throughput sequencing of two Brassica rapa genotypes in different tissues and grown across different environments      
dateReleased:
05-01-2013
description:
Deep RNA-Seq of two Brassica rapa genotypes—R500 (var. trilocularis, Yellow Sarson) and IMB211 (a rapid cycling variety)—using eight different tissues (root, internode, leaf, petiole, apical meristem, floral meristem, silique, and seedling) grown across three different environments (growth chamber, greenhouse and field) and under two different treatments (simulated sun and simulated shade) generated 2.3 billion high-quality Illumina reads.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-4192
refinement:
raw
keywords:
functional genomics
dateModified:
04-15-2016
creators:
Julin Maloof
availability:
available
types:
gene expression
name:
Brassica rapa
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4192/E-MTAB-4192.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4192/E-MTAB-4192.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress