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Title: Time course RNA-seq analysis of barley powdery mildew fungus Bgh infecting immunocompromised Arabidopsis thaliana      
dateReleased:
05-27-2013
description:
RNA-seq experiments detected fungal expression patterns during infection of immunocompromised Arabidopsis thaliana 3 biological replicates per condition. Arabidopsis plants without (pps) or with (B12) the MLA1-HA construct in pen2 pad4 sag101 background were challenged with either Bgh isolate K1 expressing the cognate AVRA1 effector for MLA1 or Bgh isolate A6 expressing other AVRA effectors. Samples were collected at 6, 12, 18, 24 hours post inoculation (hpi) of Bgh.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-43163
refinement:
raw
alternateIdentifiers:
43163
keywords:
functional genomics
dateModified:
05-02-2014
availability:
available
types:
gene expression
name:
Blumeria graminis f. sp. hordei
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-43163/E-GEOD-43163.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-43163/E-GEOD-43163.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE43163
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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