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Title: Methylation profiling by array of human oral squamous cell carcinoma samples against matched normal oral mucosa samples from the same cohort of patients      
dateReleased:
08-02-2013
description:
This study aims to compare the DNA methylome across a large cohort of oral squamous cell carcinoma and matched normal samples. DNA from 44 OSCCs and paired normal mucosa were analysed using Illumina GoldenGate methylation array. This data was correlated with extracapsular spread (extracapsular spread), Human Papilloma Virus (HPV) status, recurrence and 5-year survival.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-1298
refinement:
raw
keywords:
functional genomics
dateModified:
05-03-2014
creators:
Puthen Veettil Jithesh
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-GEOD-9183
name:
Illumina GoldenGate Methylation Cancer Panel I
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-1298/E-MTAB-1298.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-1298/E-MTAB-1298.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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