Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: The global gene expression pattern by YDR374C deletion      
dateReleased:
08-23-2013
description:
The Ydr374c is the only protein that has the YTH domain in Saccharomyces cerevisiae. The YTH domain was identified by comparing all known protein sequences with the YT521-B splicing factor, and it is found only in eukaryotes. Recently, it has been reported that the YTH domain conveys RNA-binding ability to a new class of proteins. However, the roles of most YTH family members lacking common sequence motifs outside the YTH domain are unknown. Therefore, to investigate the function of Ydr374c, microarray analysis was performed using the wild-type and YDR374C deletion strains. For the microarray analysis, wild-type and YDR374C deletion strains were cultured in SD medium and harvested at the mid-exponential phase (OD600=0.7), and total RNA was extracted.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-50086
refinement:
raw
alternateIdentifiers:
50086
keywords:
functional genomics
dateModified:
06-03-2014
availability:
available
types:
gene expression
name:
Saccharomyces cerevisiae
ID:
A-MEXP-1440
name:
Agilent Yeast Oligo Microarray (V2) 013384 G4140B
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-50086/E-GEOD-50086.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-50086/E-GEOD-50086.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50086
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.