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Title: B. subtilis response to rotten meat volatiles      
dateReleased:
09-04-2013
description:
To find a promoter upregulated in the presence of rotten meat, we exposed B. subtilis 168 to the volatiles of rotten meat (mixed beef/pork) and performed a microarray comparing it to B. subtilis which was not exposed to the meat. The results where used to build iGEM Groningen 2012s Food Warden, a spoiled meat detector. Find more information at: 2012.igem.org/Team:Groningen One condition design; including dye swap, two technical replicates and two experimental replicates
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-50538
refinement:
raw
alternateIdentifiers:
50538
keywords:
functional genomics
dateModified:
06-03-2014
availability:
available
types:
gene expression
name:
Bacillus subtilis subsp. subtilis str. 168
ID:
A-GEOD-17671
name:
Bacillus subtilis 168 Oligo Array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-50538/E-GEOD-50538.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-50538/E-GEOD-50538.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE50538
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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