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Title: Real-time quantitative PCR analysis of hormone-receptor-negative primary breast tumors      
dateReleased:
10-25-2013
description:
Total RNA was extracted from FFPE samples of 139 chemotherapy-naïve hormone-receptor-negative breast cancers pooled from three sample sources and assayed for the expression of 21 genes within two previously reported microarray-derived prognostic signatures in 6 RT-PCR multiplexes. RT-PCR gene expression profiling. Total RNA was extracted from 10 micron FFPE sections, and expression levels of the 21 genes of interest plus two reference genes were quantified with 6 multiplex RT-PCR TaqMan assays.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-51630
refinement:
raw
alternateIdentifiers:
51630
keywords:
functional genomics
dateModified:
06-11-2014
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-GEOD-17831
name:
HRneg prognostic signatures PCR assay panel
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-51630/E-GEOD-51630.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-51630/E-GEOD-51630.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE51630
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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