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Title: 48 apple trees from a segregating F1 population from a cross of 'Ottawa 3' x 'Robusta 5'      
dateReleased:
11-04-2013
description:
48 apple trees from a segregating F1 population from a cross of 'Ottawa 3' x 'Robusta 5' were analyzed by microarray to identify gene expression differences between the individuals to correlate gene expression patterns with phenotypic traits segregating in the population 48 individual apple trees were assayed once each using RNA isolated from a single shoot tip from each tree. There were no biological or technical replicates in the experiment. There was no control sample, since all 48 were compared to each other.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-43268
refinement:
raw
alternateIdentifiers:
43268
keywords:
functional genomics
dateModified:
06-02-2014
availability:
available
types:
gene expression
name:
Malus domestica
ID:
A-GEOD-16447
name:
NimbleGen Second Generation Apple 26K Array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-43268/E-GEOD-43268.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-43268/E-GEOD-43268.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE43268
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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