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Title: Genomic Array Footprinting of Shewanella oneidensis grown under aerobic conditions      
dateReleased:
12-31-2013
description:
We undertook a genomic array footprinting to identify genes important for aerobic growth of S. oneidensis. The data revealed that removal of 96 genes resulted in significant impacts on aerobic growth. Experimental cells collected 5 days after competition started; Control cells collected 1 day after competition started. In total, 6 samples were studied (3 for 5 days and 3 for 1 day, 3 replicates).
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-42479
refinement:
raw
alternateIdentifiers:
42479
keywords:
functional genomics
dateModified:
05-03-2014
availability:
available
types:
gene expression
name:
Shewanella oneidensis
ID:
A-GEOD-3253
name:
ORNL Shewanella oneidensis 11.5k array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-42479/E-GEOD-42479.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-42479/E-GEOD-42479.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE42479
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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