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Title: Expression data from Pseudomonas putida KT2440: Fuelling the central metabolism with aromatic compounds      
dateReleased:
02-01-2014
description:
We used Progenika oligonucleotide arrays to monitore the gene expression of P. putida during carbon source stimulus experiments. After ensuring steady state conditions on benzoate, the stimuli were introduced by changing the carbon source from benzoate to glucose, from glucose to fructose and from fructose to benzoate, respectively. The single stimuli were monitored over a time period from 10 to 120 minutes after changing the carbon source by three representative timepoints. Moreover, the steady state conditions were compared among each other. Supplementary file: Individual normalized signal intensity VALUES for each channel of each array are provided in the FullNormalizedMatrix.txt file.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-26785
refinement:
raw
alternateIdentifiers:
26785
keywords:
functional genomics
dateModified:
06-02-2014
availability:
available
types:
gene expression
name:
Pseudomonas putida KT2440
ID:
A-GEOD-10933
name:
Progenika P putida KT2440 oligo array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-26785/E-GEOD-26785.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-26785/E-GEOD-26785.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE26785
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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