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Title: Expression data from Pseudomonas putida KT2440 Tn5 mutants      
dateReleased:
02-01-2014
description:
We used Progenika oligonucleotide arrays to monitor the gene expression after cold shock from 30°C to 10°C. The 10°C samples of the P. putida wild type were compared to those of the respective P. putida KT2440 Tn5 mutants affected in either cbrA (PP4695), cbrB (PP4696), pcnB (PP4697), vacB (PP4880) or bipA (PP5044). Cultures were grown in minimal medium supplemented with succinate at 30°C. In mid-exponential phase, cells were cooled down to 10°C. Two hours after the medium had reached 10°C, cells were harvested for subsequent RNA extraction.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-28257
refinement:
raw
alternateIdentifiers:
28257
keywords:
functional genomics
dateModified:
06-02-2014
availability:
available
types:
gene expression
name:
Pseudomonas putida KT2440
ID:
A-GEOD-10933
name:
Progenika P putida KT2440 oligo array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-28257/E-GEOD-28257.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-28257/E-GEOD-28257.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE28257
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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