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Title: microRNA expression profiling of urine and cancer tissues of patients with bladder cancer, and those from the controls with haematuria      
dateReleased:
04-16-2014
description:
Mid-stream urine was collected from bladder cancer patients prior to surgery. Both tumor tissue and normal bladder mucosa that are located at >3cm away from the tumor edge were obtained by cystoscopy. For the normal controls with haematuria, urine samples were collected from patients who had normal cystoscopic finding and absence of malignancy with >6 months follow-up. All urine samples were centrifuged at 2500 r.c.f. for 20 minutes and the urine supernatant was collected. Total RNA of urine supernatant and frozen tissue was extracted using MirVanaTM PARISTM Kit (Ambion) in accordance with the manufacturer’s recommended protocols. AgilentTM Human miRNA Microarray Chip (Release 13.0, Agilent Technologies, Santa Clara, CA, USA) was used to determine the microRNA expression profiles of the samples.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-2573
refinement:
raw
dateSubmitted:
05-17-2010
keywords:
functional genomics
dateModified:
02-02-2017
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-MEXP-2276
name:
Agilent 031181 Human and human viral miRNAs 8x60k
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-2573/E-MTAB-2573.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-2573/E-MTAB-2573.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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