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Title: Ribonucleoprotein immunoprecipitation microarray (RIp-chip) study with Exo2 and Eti1 proteins      
dateReleased:
05-05-2014
description:
We have used RIp-chip to identify mRNAs that coprecipitae with specific proteins, and later used the protein RNA interactions to predict protein-protein associations. To test whether some of the interactions we see require intact polysomes (that is, ribosomes translating mRNAs) we treated the extracts (and, in some cases, also the cells) with different compounds. In this case, we have a standard protocol, one in which the buffers contain EDTA, and one in which it includes puromycin.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-1856
refinement:
raw
keywords:
functional genomics
dateModified:
06-03-2014
creators:
Juan Mata
availability:
available
types:
gene expression
name:
Schizosaccharomyces pombe
ID:
A-MEXP-2049
name:
S.pombe_8x15k_v1.0
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-1856/E-MTAB-1856.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-1856/E-MTAB-1856.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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