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Title: RNA-seq of Sphagnum subsecundum and S. cribrosum collected in the field and grown under common garden condition for 6 months      
dateReleased:
06-30-2014
description:
In diploid organisms, selfing reduces the efficiency of selection in purging deleterious mutations from a population. This need not be the case for all organisms. Some plants, for example, undergo an extreme from of selfing known as intragametophytic selfing, which immediately exposes all recessive deleterious mutations in a parental genome to selective purging. Using the transcriptome data from S. subsecundum, S. cribrosum and 2 other previously published moss transcriptome, we ask how effectively deleterious mutations are purged from such plants. Specifically, we study genome-wide signatures of selective purging in the transcriptomes of four moss species that differ in their incidence of selfing and outcrossing.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-2482
refinement:
raw
dateSubmitted:
02-08-2013
keywords:
functional genomics
dateModified:
04-15-2014
creators:
Nicolas Devos
availability:
available
types:
gene expression
name:
species design
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-2482/E-MTAB-2482.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-2482/E-MTAB-2482.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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