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Title: Comparative microRNA profiling of sporadic and BRCA1 associated basal-like breast cancers      
dateReleased:
09-16-2014
description:
Analysis of miRNA expression in grade 3 luminal, sporadic and BRCA1 associated basal-like breast cancers 44 primary grade III breast cancer (11 BRCA1 basal, 16 sporadic basal, 17 luminal) and 13 normal breast FFPE (formalin fixed, paraffin embedded) specimens, plus 7 controls and 5 cell lines were analysed. The aim of the study was to derive grade-specific miRNA signatures for sporadic and BRCA1 basal-like breast cancers, and to ascertain an immunohistochemical profile regulated by BRCA1 specific miRNAs for potential diagnostic uses.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-61438
refinement:
raw
alternateIdentifiers:
61438
keywords:
functional genomics
dateModified:
09-20-2014
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-GEOD-8179
name:
Illumina Human v2 MicroRNA expression beadchip
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-61438/E-GEOD-61438.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-61438/E-GEOD-61438.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE61438
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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