Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: Bradyrhizobium japonicum_Bacteroids vs. Bacteria grown in HM-Arabinose      
dateReleased:
11-01-2014
description:
A transcriptomic analysis of bacteroids isolated from soybean plants inoculated with B. japonicum USDA 110, relative to cells cultured in HM-arabinose medium was performed and the results combined with two other transcriptomic analyses to form a reiterated pool of transcripts that define genes essential for symbiotic nitrogen fixation. Four independent biological replicates for bacteroids and free-living cells. Total of 8 arrays including dye swap.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-60279
refinement:
raw
alternateIdentifiers:
60279
keywords:
functional genomics
dateModified:
11-08-2014
availability:
available
types:
gene expression
name:
Bradyrhizobium diazoefficiens USDA 110
ID:
A-GEOD-5341
name:
USDA Bradyrhizobium japonicum 8.5K (BJ_USDA110_Oligo_Array)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-60279/E-GEOD-60279.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-60279/E-GEOD-60279.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE60279
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.