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Title: Transcription profiling by array of responses to hypoxia between a hypoxia tolerant fish (tidepool sculpin; Oligocottus maculosus) and a hypoxia intolerant fish (silverspotted sculpin; Blepsias cirrhosus) over a 72-hour hypoxia time-course      
dateReleased:
11-01-2014
description:
Transcriptional responses to hypoxia were compared between a hypoxia tolerant fish (tidepool sculpin; Oligocottus maculosus) and a hypoxia intolerant fish (silverspotted sculpin; Blepsias cirrhosus). To determine if, and how, transcriptional plasticity is associated with differences in hypoxia tolerance, each species was subjected to a hypoxic time-course and liver was sampled at normoxia, 3hr, 8hr, 24hr, 48hr and 72hr of hypoxia. The hypoxic level for each species was scaled to the species' own tolerance level (relative exposure) in order to elicit similar tissue level hypoxia between the two sculpin species. Each species was also subjected to a single environmental O2 tension (absolute exposure) and sampled at 24 hrs of hypoxia.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3043
refinement:
raw
dateSubmitted:
10-01-2010
keywords:
functional genomics
dateModified:
10-29-2014
availability:
available
types:
gene expression
name:
time series design
ID:
A-MTAB-529
name:
C.analis_hypoxia_Liver_Muscle
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3043/E-MTAB-3043.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3043/E-MTAB-3043.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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