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Title: Influence of RppH on the small RNA transcriptome of Neisseria gonorrhoeae MS11      
dateReleased:
11-04-2014
description:
We assessed the small RNA transcriptome of Neisseria gonorrhoeae strain MS11 in two genetic backgrounds; using wild type cells as well as cells carrying a rppH insertional mutation. It was found that the presence of the RppH enzyme affected both the quantity and length of small RNAs in various chromosomal locations. However, in comparing the two transcriptomes, we found that not all small RNAs were differentially expressed, suggesting that RppH targets only a subset of transcripts. Analysis of the small RNA transcriptome of N. gonorrhoeae in a wild type and ΔrppH mutant background.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-62926
refinement:
raw
alternateIdentifiers:
62926
keywords:
functional genomics
dateModified:
11-08-2014
availability:
available
types:
gene expression
name:
Neisseria gonorrhoeae
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-62926/E-GEOD-62926.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-62926/E-GEOD-62926.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE62926
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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