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Title: Expression data from adult mouse cortex harvested at two different zeitgeber (ZT) timepoints of the 24h cycle      
dateReleased:
11-21-2014
description:
Gene expression in forebrain structures change during day and night depending on circadian and rest-activity cycles. Clock genes have been shown to be involved in the control of circadian and sleep-wake control. In this study, we aimed at studying the consequences of loss of SHARP1 (DEC2/BHLHE40) and SHARP2 (DEC1/BHLHE41) on cortical gene expression at rest (ZT4) and activity (ZT16) phases. We harvested cortex tissue from individual mice from WT and SHARP1/2 double null mutant mice at ZT4 and ZT16, prepared total RNA and subjected the corresponding samples (n=2 biological replicates per timepoint and genotype) to Affymetrix genechip analysis to assay the changes of gene expression.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-59941
refinement:
raw
alternateIdentifiers:
59941
keywords:
functional genomics
dateModified:
11-30-2014
availability:
available
types:
gene expression
name:
Mus musculus
ID:
A-AFFY-6
name:
Affymetrix GeneChip Murine Genome U74Av2 [MG_U74Av2]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-59941/E-GEOD-59941.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-59941/E-GEOD-59941.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE59941
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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