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Title: Transcription profiling by high throughput sequencing of Medicago truncatula roots after the inoculation with Sinorhizobium medicae      
dateReleased:
01-31-2015
description:
Transcriptome analysis of early transcriptional changes occuring in M. truncatula roots minutes to days after innoculation with Sinorhizobium medicae. With the goal of characterizing the host’s earliest transcriptional responses to bacterial signals at high temporal resolution, 5-d-old roots of M. truncatula were inoculated with S. medicae ABS7M (pXLGD4) at densities of 150 cells µL−1 (optical density at 600 nm = 0.001). Tissue was sampled at nine points over a 48-h time course, with the first postinoculation time point at 30 min.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-5140
refinement:
raw
keywords:
functional genomics
dateModified:
09-30-2016
availability:
available
types:
gene expression
name:
Medicago truncatula
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5140/E-MTAB-5140.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5140/E-MTAB-5140.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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