Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: A secreted effector protein of Ustilago maydis guides maize leaf cells to form tumors      
dateReleased:
03-09-2015
description:
Zea mays transcriptome profiling of infected seedlings by the Ustilago maydis wildtype and the seedling specific effector mutant demonstrated the variation of gene expression in the mutant and the classes of genes that are absent in the mutant as compared to the wildtype U. maydis SG200 strain. Two dye competitive hybridizations were performed on Agilent Oligo arrays. Comparison were done 1) with mock and infected samples at 6dpi. 2) between the two 6dpi infected samples with wildtype and the secreted effector mutant
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-63077
refinement:
raw
alternateIdentifiers:
63077
keywords:
functional genomics
dateModified:
03-16-2015
availability:
available
types:
gene expression
ID:
A-GEOD-19393
name:
Agilent-016047 Maize Gene Expression Microarray 4x44K (Feature Number)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-63077/E-GEOD-63077.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-63077/E-GEOD-63077.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE63077
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.