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Title: Microarray analysis of DNA methylation in metastatic versus non metastatic breast cancers      
dateReleased:
03-20-2015
description:
19 non-metastatic breast cancers (controls) and 19 breast cancers showing metastases or metastatic relapse within 5 years (cases) were extracted from a multi-institutional case series of 123 breast cancer patients . Cases and controls were analyzed for DNA methylation over 56 genes by the MethDet assay [1]using a dedicated microarray (MethDet56). 1. Levenson VV, Melnikov AA: The MethDet: a technology for biomarker development. Expert Rev Mol Diagn 2011, 11:807-812.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3153
refinement:
raw
dateSubmitted:
07-29-2010
keywords:
functional genomics
dateModified:
07-08-2016
creators:
Emanuela Guerra
availability:
available
types:
gene expression
name:
Homo sapiens
name:
case control design
ID:
A-MTAB-539
name:
E. Guerra human CpG island (MethDet56) array
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3153/E-MTAB-3153.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3153/E-MTAB-3153.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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