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Title: Activation of defense pathways in Scots pine bark after feeding by Pine Weevil (Hylobius abietis)      
dateReleased:
04-01-2015
description:
Coniferous trees use the oleoresin, a mixture of non-volatile non-volatile diterpene acids and a large (20-50%) volatile fraction of mono- and sesquiterpenes, as a defence tool against damaging herbivores and pathogens. Volatilization of monoterpenes increases viscosity of oleoresin and finally leading to polymerization of resin and a formation of protective solid plug. Resin storing conifers form an important source of volatile organic compounds (VOCs) mainly dominated by volatile monoterpenes. In the atmosphere, conifer VOCs react with ozone and OH and nitrous oxide radicals forming secondary organic compounds. This project seeks a better understanding of the genetic control of conifer defences and the role of monoterpenoid compounds under biotic stresses. Two separate samples were analysed (control-unchallenged and treatment-infected with the insect). There were a total of 3 biological replicates for the control samples and another set of three biological replicates for the treatment samples.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-60383
refinement:
raw
alternateIdentifiers:
60383
keywords:
functional genomics
dateModified:
04-04-2015
availability:
available
types:
gene expression
name:
Pinus sylvestris
ID:
A-GEOD-19078
name:
NimbleGen Pine 36K array v1.0
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-60383/E-GEOD-60383.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-60383/E-GEOD-60383.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE60383
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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