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Title: RNA-Seq CAGE (Cap Analysis of Gene Expression) analysis of mice cells in RIKEN FANTOM5 project      
dateReleased:
05-14-2015
description:
This experiment captures the expression data reported by the RIKEN FANTOM5 project ( ), focusing on mice cell data which was deposited in the seqence read archive (SRA) under study accession DRP001032 ( ) . The samples in this experiment can also be found on a dedicated page of the FANTOM website: . Since this is CAGE analsyis, gene expression data is reported by FANTOM5 in TPMs (tags per milliion) for gene promoters. This is in conjunction with E-MTAB-3577 ()
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3578
refinement:
raw
keywords:
functional genomics
dateModified:
05-14-2015
availability:
available
types:
gene expression
name:
Mus musculus
name:
organism part comparison design
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3578/E-MTAB-3578.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3578/E-MTAB-3578.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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