biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
| Title: | RNA-Seq CAGE (Cap Analysis of Gene Expression) analysis of mice cells in RIKEN FANTOM5 project
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| dateReleased: |
05-14-2015
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| description: |
This experiment captures the expression data reported by the RIKEN FANTOM5 project ( ), focusing on mice cell data which was deposited in the seqence read archive (SRA) under study accession DRP001032 ( ) . The samples in this experiment can also be found on a dedicated page of the FANTOM website: . Since this is CAGE analsyis, gene expression data is reported by FANTOM5 in TPMs (tags per milliion) for gene promoters. This is in conjunction with E-MTAB-3577 ()
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| privacy: |
not applicable
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| aggregation: |
instance of dataset
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| ID: |
E-MTAB-3578
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| refinement: |
raw
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| keywords: |
functional genomics
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| dateModified: |
05-14-2015
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| availability: |
available
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| types: |
gene expression
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| name: |
Mus musculus
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| name: |
organism part comparison design
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3578/E-MTAB-3578.raw.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3578/E-MTAB-3578.processed.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| abbreviation: |
EBI
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| homePage: | http://www.ebi.ac.uk/ |
| ID: |
SCR:004727
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| name: |
European Bioinformatics Institute
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| homePage: | https://www.ebi.ac.uk/arrayexpress/ |
| ID: |
SCR:002964
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| name: |
ArrayExpress
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