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Title: Transcriptional profiles of Arabidopsis stomataless mutants      
dateReleased:
07-02-2015
description:
Stomataless Arabidopsis thaliana mutants spch-3 and mute-3 are extreme dwarfs but can produce cotyledons and tiny leaves, providing a system to interrogate plant life in the absence of stomata. To this end, we compared the transcriptomes of mutant cotyledons lacking SPCH or MUTE functions, and therefore lacking stomata, with those of wild-type, stomata-bearing Col-0 accession. RNA was obtained from 21 days old cotyledons collected from 9 independent biological replicates per genotype. These were pooled in 3x3 replicates and used to hybridize Affymetrix ATH1 microarrays.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3416
refinement:
raw
keywords:
functional genomics
dateModified:
07-02-2015
availability:
available
types:
gene expression
name:
Arabidopsis thaliana
ID:
A-AFFY-2
name:
Affymetrix GeneChip Arabidopsis Genome [ATH1-121501]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3416/E-MTAB-3416.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3416/E-MTAB-3416.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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