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Title: ChIP-seq of PPD2 target genes in Arabidopsis cell suspension culture overexpressing an HBH-tagged PPD2      
dateReleased:
07-07-2015
description:
To identify the direct target genes of PPD2, tandem chromatin affinity purification (TChAP, Verkest et al. (2014)), a variant of chromatin immunoprecipitation (ChIP) in which tandem affinity tags are used instead of epitope tags, followed by sequencing (TChAP-Seq) was performed. An Arabidopsis cell suspension culture overexpressing an HBH-tagged PPD2 was used for the purification of the chromatin bound by PPD2.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3046
refinement:
raw
keywords:
functional genomics
dateModified:
07-07-2015
availability:
available
types:
gene expression
name:
Arabidopsis thaliana
name:
genetic modification design
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3046/E-MTAB-3046.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3046/E-MTAB-3046.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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