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Title: Chip-SIP analysis of Monterey Bay surface waters incubated with organic carbon substrates      
dateReleased:
07-23-2015
description:
October 2013 surface seawater collected from Monterey Bay was incubated with 1 micromolar 13C labeled glucose, starch, acetate, lipids, protein, or amino acids for 12 hours. Community RNA was extracted and hybridized to a Roche Nimblegen microarray and analyzed by NanoSIMS to obtain isotope ratio data for all probe spots. Two Chips for fluorescence, and 15 Chips for different substrates from samples incubated for 12 or 36 hours.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-71228
refinement:
raw
alternateIdentifiers:
71228
keywords:
functional genomics
dateModified:
08-20-2015
availability:
available
types:
gene expression
name:
marine metagenome
ID:
A-GEOD-20727
name:
NimbleGen marine metagenome array [XM_Nov2012_RMB]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-71228/E-GEOD-71228.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-71228/E-GEOD-71228.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE71228
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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