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Title: Histone dosage and gene expression changes in Halobacterium salinarum      
dateReleased:
08-31-2015
description:
We set out to determine a) if histone in Halobacterium salinarum regulates transcription and b) whether the magnitude and extent of these changes matches those observed in organisms which use histone protein as their primary DNA packaging agent. To this end, gene expression data for a histone knock-out (Δura3ΔhpyA) strain versus parent (Δura3) were collected. The histone deletion mutant and parent strain, at log and stationary phase, were compared to the common reference strain NRC-1 (log). There are three biological replicates each, plus dye-flips, for a total of 24 arrays
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-54599
refinement:
raw
alternateIdentifiers:
54599
keywords:
functional genomics
dateModified:
09-06-2015
availability:
available
types:
gene expression
name:
Halobacterium sp. NRC-1
ID:
A-GEOD-14876
name:
Duke_HspNRC1_ORF_Array_v1.0
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-54599/E-GEOD-54599.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-54599/E-GEOD-54599.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54599
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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