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Title: Comparison of transcriptomic profiling between recovery and death group in H7N9 severe infection      
dateReleased:
10-08-2015
description:
Transcriptomic analysis confirms increased cellular activation in the patient recovery group. To identify molecular signatures correlated with H7N9 disease outcomes, we analysed the immune-related transcriptomes for PBMCs from 4 of the recovered (a73 d11, a134 d22, a20 d22, and a9 d21) and 4 of the fatal cases (a22 d22, a33 d21, a118 d19, and a131 d22). Total RNA was run on Affymetrix Human Gene ST 2.0 arrays and details of the probeset level normalisation and differential expression analysis are given in the Methods.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3005
refinement:
raw
dateSubmitted:
03-11-2014
keywords:
functional genomics
dateModified:
10-10-2014
creators:
Zhongfang Wang
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-GEOD-17889
name:
[HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [HuGene20stv1_Hs_ENTREZG_16.0.0]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3005/E-MTAB-3005.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3005/E-MTAB-3005.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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