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Title: Analysis of whole-genome chromosomal alterations in primary cutaneous melanoma      
dateReleased:
11-01-2015
description:
In this experiment, FFPE samples of 41 primary cutaneous melanoma, 2 metastatic melanoma and 6 normal skin were used for DNA extraction and genotyping by Affymetrix OncoScan FFPE Assay, in order to define chromosomal alterations in copy number and loss of heterozygosity. Genomic damage was then correlated with clinical features of melanoma.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-3481
refinement:
raw
dateSubmitted:
06-13-2014
keywords:
functional genomics
dateModified:
04-09-2015
creators:
Greta Gandolfi
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-GEOD-18602
name:
[OncoScan] Affymetrix OncoScan FFPE Assay
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3481/E-MTAB-3481.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-3481/E-MTAB-3481.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress
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