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Title: Epigenetic (re)programming of caste-specific behavior in the ant Camponotus floridanus      
dateReleased:
12-10-2015
description:
Comparison of transcriptome and histone acetylation in Camponotus floridanus minor scout brains following 45 day treatment with small molecule pharmacologicals. The goal of this study was to characterize the molecular changes in gene expression and histone modification caused by ad lib feeding small molecule HAT and HDAC inhibitors Treated ants: 21 individual single brain samples, generating by linear amplification of polyA+ cDNA prepared from 15% of single brains; ChIP-seq for H3K9ac and H3K27ac was also prepared from 9 of these brains; ChIP-seq for H2O and C646 treated larvae also included; RNA-seq for technical replicate subsamples of a single brain also included
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-69553
refinement:
raw
alternateIdentifiers:
69553
keywords:
functional genomics
dateModified:
12-20-2015
availability:
available
types:
gene expression
name:
Camponotus floridanus
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-69553/E-GEOD-69553.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-69553/E-GEOD-69553.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE69553
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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