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Title: Expression analysis of Acacia koa in response to mechanical stimuli      
dateReleased:
12-14-2015
description:
The genes induced by mechanical stimuli may be also involved in disease resistance and wood formation and development in Acacia koa. If so, mechanically stressed A. koa may be used as a model to study disease resistance and wood formation and development. Microarray analysis was performed to determine expression levels of 4,000 genes related to disease resistance and wood development in Acacia koa in response to mechanical stimuli (touch). RNA was extracted from two groups of A. koa seedlings, (1) mechanically stressed and (2) unstressed koa seedlings. Each group had two biological replicates (n=2), where n represents pools of approcimately 20 individuals.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-73889
refinement:
raw
alternateIdentifiers:
73889
keywords:
functional genomics
dateModified:
12-19-2015
availability:
available
types:
gene expression
name:
Acacia koa
ID:
A-GEOD-21012
name:
NimbleGen Acacia koa 4x72K array v1.0
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-73889/E-GEOD-73889.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-73889/E-GEOD-73889.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE73889
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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