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Title: Transcriptome profile for roots of the rice plants which showed favorable morpho-physiological adaptation when subjected to severe drought stress      
dateReleased:
02-25-2016
description:
To understand how OsNAM12.1 over-expression influences the target genes within qDTY12.1 and across the genome to affect root growth, the root transcriptome of Vandana, 481-B, IR64-Tr-E2, and IR64-WT were compared under control and drought conditions. Drought induced gene expression was studied in the roots of the rice plants subjected to severe drought. Seeds of Vandana, 481-B, IR64 and the OsNAM12.1 overexpression line (OsNAM Event 2) were sown in 5 biological replicates in a randomized complete block design for both the well watered and drought stress treatments.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-78504
refinement:
raw
alternateIdentifiers:
78504
keywords:
functional genomics
dateModified:
03-07-2016
availability:
available
types:
gene expression
name:
Oryza sativa
ID:
A-GEOD-21470
name:
Agilent-045741 Rice custom expression array (Probe name version)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-78504/E-GEOD-78504.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-78504/E-GEOD-78504.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE78504
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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