Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: Comparison of gene expression in M. tuberculosis TrxB2-DUC mutant treated or not with atc      
dateReleased:
05-12-2016
description:
M. tuberculosis thioredoxin reductase (TrxB2) is essential for bacterial survival in vitro and in vivo. To gain insight into the mechanisms underlying lethality caused by TrxB2 depletion, we compared the mRNA profiles of TrxB2-DUC mutant in the presence and absence of atc. We grew bacteria in 7H9 medium to an OD of 0.5~0.6 and then added atc to a final concentration of 400ng/ml. Samples were collected 6 h and 24 h after atc treatment.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-GEOD-72329
refinement:
raw
alternateIdentifiers:
72329
keywords:
functional genomics
dateModified:
05-23-2016
availability:
available
types:
gene expression
name:
Mycobacterium tuberculosis H37Rv
ID:
A-GEOD-16177
name:
Agilent-019943 Genotypic Technology custom M tuberculosis h37Rv Whole Genome 8x15k GE Microarray [Gene Name version]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-72329/E-GEOD-72329.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-72329/E-GEOD-72329.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72329
storedIn:
Gene Expression Omnibus
qualifier:
not compressed
format:
HTML
accessType:
landing page
primary:
true
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress