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Title: Transcription profiling of Lotus japonicus grown under different nitrogen sources      
dateReleased:
05-17-2016
description:
Transcriptomic profiling was carried out for leaves of Lotus japonicus plants grown with different mineral nitrogen sources (NO3-, NH4+ or NH4NO3) or under conditions of biological nitrogen fixation (Nod). Nodulated plants were inoculated with Mesorhizobium loti and watered with nitrogen-free “Hornum” medium supplemented with 3 mM KCl. Plants under different nitrogen nutritions were watered with “Hornum” nutrient solution containing 10 mM KNO3 (NO3- plants) or with 10 mM NH4Cl supplemented with 3 mM KCl (NH4+ plants) or with 5 mM NH4NO3 supplemented with 3 mM KNO3 (NH4NO3 plants). After all the plants reached the size of 7 trifoils, leaf tissue was harvested. Every harvest involved at least three independent biological replicates for each treatment.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-4177
refinement:
raw
dateSubmitted:
12-01-2015
keywords:
functional genomics
dateModified:
05-16-2016
availability:
available
types:
gene expression
name:
Lotus japonicus
name:
growth condition design
ID:
A-MTAB-580
name:
Agilent custom microarray Lotus japonicus 8x60K v1.0. Agilent ID 036367
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4177/E-MTAB-4177.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4177/E-MTAB-4177.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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