biomedical and healthCAre Data Discovery Index Ecosystem
biomedical and healthCAre Data Discovery Index Ecosystem
| Title: | Genome-wide expression of liver and udder tissue in response to E. coli treatment in early lactation dairy cows
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| dateReleased: |
07-01-2016
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| description: |
We performed a global gene-expression analysis of mammary gland and liver tissue collected from dairy cows that had been exposed to a controlled E. coli infection. At time = 0, each of the periparturient dairy cows received 20-40 colony-forming units of live E. coli in one front quarter of the udder. Biopsy samples of healthy and infected udder tissue were collected at T = 24 h post-infection (p.i.) and at T = 192 h p.i. to represent the acute phase response (APR). A time series of liver biopsies was collected at -144, 12, 24, and 192 h relative to time of inoculation. Hf=right forward teat Vf=left forward teat
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| privacy: |
not applicable
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| aggregation: |
instance of dataset
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| ID: |
E-GEOD-75379
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| refinement: |
raw
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| alternateIdentifiers: |
75379
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| keywords: |
functional genomics
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| dateModified: |
07-11-2016
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| creators: |
Peter Sørensen
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| availability: |
available
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| types: |
gene expression
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| name: |
Bos taurus
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-75379/E-GEOD-75379.raw.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| accessURL: | https://www.ebi.ac.uk/arrayexpress/files/E-GEOD-75379/E-GEOD-75379.processed.1.zip |
| storedIn: |
ArrayExpress
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| qualifier: |
gzip compressed
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| format: |
TXT
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| accessType: |
download
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| authentication: |
none
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| authorization: |
none
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| accessURL: | https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE75379 |
| storedIn: |
Gene Expression Omnibus
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| qualifier: |
not compressed
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| format: |
HTML
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| accessType: |
landing page
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| primary: |
true
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| authentication: |
none
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| authorization: |
none
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| abbreviation: |
EBI
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| homePage: | http://www.ebi.ac.uk/ |
| ID: |
SCR:004727
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| name: |
European Bioinformatics Institute
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| homePage: | https://www.ebi.ac.uk/arrayexpress/ |
| ID: |
SCR:002964
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| name: |
ArrayExpress
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