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Title: Transcriptome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)      
dateReleased:
09-19-2016
description:
We classified samples and deciphered a key genes signature of intratumor heterogeneity by Principal Component Analysis and Weighted Gene Co-expression Network Analysis. Transcriptome analysis highlighted a pronounced intratumor architecture reflecting the surgical sampling plan of the study and identified gene modules associated with hallmarks of cancer.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-5092
refinement:
raw
dateSubmitted:
09-19-2009
keywords:
functional genomics
dateModified:
09-20-2016
creators:
Amandine Etcheverry
availability:
available
types:
gene expression
name:
Homo sapiens
name:
cell type comparison design
ID:
A-AGIL-11
name:
Agilent Whole Human Genome Oligo Microarray 012391 G4112A
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5092/E-MTAB-5092.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5092/E-MTAB-5092.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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