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Title: Transcription profiling by array of human endothelial cells from colorectal carcinoma biopsies with high and low GBP-1 expression      
dateReleased:
10-10-2016
description:
Biopsies from patients with colorectal carcinoma were obtained freshly. Two third of the biopsies were used to isolated tumor endothelial cells by collagenase digestion and subsequent CD31-MACS purification. The remaining third of the original biopsy was used to stain immunohistochemically for GBP-1 expression. Patients were grouped into "GBP-1 high" and "GBP-1 low" according to their GBP-1 expression level. The transcriptome from the isolated tumor endothelial cells (n=8 patients per group) was analyzed by Affymetrix GeneChip analysis.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MEXP-3991
refinement:
raw
keywords:
functional genomics
dateModified:
09-27-2016
creators:
Elisabeth Naschberger
availability:
available
types:
gene expression
name:
Homo sapiens
ID:
A-AFFY-44
name:
Affymetrix GeneChip Human Genome U133 Plus 2.0 [HG-U133_Plus_2]
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MEXP-3991/E-MEXP-3991.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MEXP-3991/E-MEXP-3991.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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