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Title: RNA-seq of A431 cell line after gefitinib treatment      
dateReleased:
12-01-2016
description:
RNA sequencing of A431 cell line samples before and after gefitinib treatment, at 0, 2, 6 and 24 hours, was performed in order to characterize the cell line's early and late response to this drug, and to compare against proteomics (mass spectrometry) characterization of the cell line using the same setup. These data were used in Branca et al., HiRIEF LC-MS enables deep proteome coverage and unbiased proteogenomics., Nat Methods. 2014 Jan;11(1):59-62 (doi: 10.1038/nmeth.2732).
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-5285
refinement:
raw
dateSubmitted:
11-16-2011
keywords:
functional genomics
dateModified:
11-30-2016
availability:
available
types:
gene expression
name:
Homo sapiens
name:
time series design
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5285/E-MTAB-5285.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-5285/E-MTAB-5285.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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