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Title: Transcription profiling of rice plants under the Sda (Air-drying) condition in shoots      
dateReleased:
12-26-2016
description:
In this series of experiments, we wanted to study the transcriptional responses of plants to different levels of water limitation. For mild drought stress, we controlled water potential (a scientific concept for dryness of soil) by using an automated watering system. This system adds water to soil based on the pF values reported by a pF sensor in soil. pF is a classical and widely used index of water potential that was first defined by Schofield (1935). For severe stress conditions, we withheld watering or even dried plants on a lab bench. Here, the transcriptional profiles were compared between well-watered and Sda-treated rice seedling shoots.Sda (Severe dehydration stress by air drying): We designated the Sda as a term that means a dehydration stress in our experiments. The dehydration stress treatment was carried out by pulling plants from the soil and leaving them on a bench.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-4137
refinement:
raw
dateSubmitted:
02-27-2014
keywords:
functional genomics
dateModified:
12-26-2016
creators:
Junya Mizoi
availability:
available
types:
gene expression
name:
Oryza sativa
ID:
A-MEXP-2298
name:
30541 new Rice (alternate layout)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4137/E-MTAB-4137.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4137/E-MTAB-4137.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

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