Mountain View
biomedical and healthCAre Data Discovery Index Ecosystem
help Advanced Search
Title: Study of the quorum sensing regulon of the acidophilic Acidithiobacillus ferrooxidans ATCC23270 with cDNA microarrays      
dateReleased:
03-15-2017
description:
To address the question of how quorum sensing controls biofilm formation in Acidithiobacillus ferrooxidans ATCC23270, the transcriptome of this organism in conditions in which quorum sensing response is stimulated by a synthetic acyl homoserine lactone (AHL) analogue has been studied. Tetrazole 9c was used in DNA microarray experiments that allowed the identification of genes regulated by quorum sensing signalling, and more particularly those involved in early biofilm formation.
privacy:
not applicable
aggregation:
instance of dataset
ID:
E-MTAB-4896
refinement:
raw
dateSubmitted:
06-27-2013
keywords:
functional genomics
dateModified:
03-15-2017
creators:
Bonnefoy Violaine
availability:
available
types:
gene expression
name:
Acidithiobacillus ferrooxidans ATCC 23270
ID:
A-MTAB-592
name:
Agilent custom Acidithiobacillus ferrooxidans ATCC 23270 gene expression array (Agilent design ID 048230)
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4896/E-MTAB-4896.raw.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
accessURL: https://www.ebi.ac.uk/arrayexpress/files/E-MTAB-4896/E-MTAB-4896.processed.1.zip
storedIn:
ArrayExpress
qualifier:
gzip compressed
format:
TXT
accessType:
download
authentication:
none
authorization:
none
abbreviation:
EBI
homePage: http://www.ebi.ac.uk/
ID:
SCR:004727
name:
European Bioinformatics Institute
homePage: https://www.ebi.ac.uk/arrayexpress/
ID:
SCR:002964
name:
ArrayExpress

Feedback?

If you are having problems using our tools, or if you would just like to send us some feedback, please post your questions on GitHub.